Research article2024Peer reviewedOpen access
Removal of Poly- and Perfluoroalkyl Substances from Natural and Wastewater by Tailored Silica-Based Adsorbents
Dudarko, Oksana; Budnyak, Tetyana; Tkachenko, Oleg et al.
Peter Agback
Department of Molecular Sciences
Faculty of Natural Resources and Agricultural Sciences
Email: peter.agback@slu.se
ORCID: 0000-0003-2226-0746
Publications
2024
2023
Research article2023Peer reviewedOpen access
All Domains of SARS-CoV-2 nsp1 Determine Translational Shutoff and Cytotoxicity of the Protein
Frolov, Ilya; Agback, Tatiana; Palchevska, Oksana et al.
Research article2023Peer reviewedOpen access
Resolution enhancement of NMR by decoupling with the low-rank Hankel model
Qiu, Tianyu; Jahangiri, Amir; Han, Xiao et al.
Research article2023Peer reviewedOpen access
NMR spectrum reconstruction as a pattern recognition problem
Jahangiri, Amir; Han, Xiao; Lesovoy, Dmitry et al.
Research article2023Peer reviewedOpen access
Soils potentially vulnerable to phosphorus losses: speciation of inorganic and organic phosphorus and estimation of leaching losses
Djodjic, Faruk; Bergstrom, Lars; Schmieder, Frank et al.
Research article2023Peer reviewedOpen access
Combined NMR and molecular dynamics conformational filter identifies unambiguously dynamic ensembles of Dengue protease NS2B/NS3pro
Agback, Tatiana; Lesovoy, Dmitry; Han, Xiao et al.
2022
Research article2022Peer reviewedOpen access
H-1, C-13 and N-15 resonance assignment of backbone and IVL-methyl side chain of the S135A mutant NS3pro/NS2B protein of Dengue II virus reveals unique secondary structure features in solution
Agback, Peter; Lesovoy, Dmitry M.; Han, Xiao et al.
Research article2022Peer reviewedOpen access
Site-specific recognition of SARS-CoV-2 nsp1 protein with a tailored titanium dioxide nanoparticle - elucidation of the complex structure using NMR data and theoretical calculation
Agback, Peter; Agback, Tatiana; Dominguez, Francisco et al.
Research article2022Peer reviewedOpen access
Assignment of IVL-Methyl side chain of the ligand-free monomeric human MALT1 paracaspase-IgL(3) domain in solution
Han, Xiao; Levkovets, Maria; Lesovoy, Dmitry et al.
2021
Research article2021Peer reviewedOpen access
NAP1L1 and NAP1L4 Binding to Hypervariable Domain of Chikungunya Virus nsP3 Protein Is Bivalent and Requires Phosphorylation
Dominguez, Francisco; Shiliaev, Nikita; Lukash, Tetyana et al.
Research article2021Peer reviewedOpen access
H-1, C-13 and N-15 resonance assignment of the SARS-CoV-2 full-length nsp1 protein and its mutants reveals its unique secondary structure features in solution
Agback, Tatiana; Dominguez, Francisco; Frolov, Ilya et al.
Research article2021Peer reviewedOpen access
Structural and Functional Characterization of Host FHL1 Protein Interaction with Hypervariable Domain of Chikungunya Virus nsP3 Protein
Lukash, Tetyana; Agback, Tatiana; Dominguez, Francisco et al.
2020
Research article2020Peer reviewedOpen access
Novel NMR Assignment Strategy Reveals Structural Heterogeneity in Solution of the nsP3 HVD Domain of Venezuelan Equine Encephalitis Virus
Agback, Peter; Shernyukov, Andrey; Dominguez, Francisco et al.
Research article2020Peer reviewedOpen access
Assigned NMR backbone resonances of the ligand-binding region domain of the pneumococcal serine-rich repeat protein (PsrP-BR) reveal a rigid monomer in solution
Schulte, Tim; Sala, Benedetta Maria; Nilvebrant, Johan et al.
Research article2020Peer reviewedOpen access
Probing contacts of inhibitor locked in transition states in the catalytic triad of DENV2 type serine protease and its mutants by 1H, 19F and 15 N NMR spectroscopy
Agback, Peter; Woestenenk, Esmeralda; Agback, Tatiana.
2019
Research article2019Peer reviewedOpen access
Structural characterization and biological function of bivalent binding of CD2AP to intrinsically disordered domain of chikungunya virus nsP3 protein
Agback, Peter; Dominguez, Francisco; Pustovalova, Yulia et al.
2018
Research article2018Peer reviewedOpen access
Direct evidence of a low barrier hydrogen bond in the catalytic triad of a Serine protease
Agback, Peter; Agback, Tatiana.
Research article2018Peer reviewedOpen access
Multiple Host Factors Interact with the Hypervariable Domain of Chikungunya Virus nsP3 and Determine Viral Replication in Cell-Specific Mode
Meshram, Chetan D.; Agback, Peter; Shiliaev, Nikita et al.
Research article2018Peer reviewed
AQuA: An Automated Quantification Algorithm for High-Throughput NMR-Based Metabolomics and Its Application in Human Plasma
Rohnisch, Hanna E.; Eriksson, Jan; Mullner, Elisabeth et al.
2017
Research article2017Peer reviewed
Wheat starch carbamate: Production, molecular characterization, and film forming properties
Menzel, Carolin; Seisenbaeva, Gulaim.; Agback, Peter et al.
Research article2017Peer reviewed
Co-refolding of a functional complex of Dengue NS3 protease and NS2B co-factor domain and backbone resonance assignment by solution NMR
Woestenenk, Esmeralda; Agback, Peter; Unnerstale, Sofia et al.
Research article2017Peer reviewedOpen access
The urine metabolome differs between lean and overweight Labrador Retriever dogs during a feed-challenge
Soder, Josefin; Hagman, Ragnvi; Dicksved, Johan et al.
2016
Conference abstract2016
Root traits of seabuckthorn
Lundquist, Per-Olof; Shah, Syed Rehmat Ullah; Shah, Syed rehmat ullah et al.
Research article2016Peer reviewed
Whole-grain rye, refined wheat, and whole-grain wheat breads influence metabolic fingerprints differently in pigs
Ivarsson, E.; Saenbungkhor, N.; Agback, P. et al.
Research article2016Peer reviewed
Changes in fecal microbiota and metabolomics in a child with juvenile idiopathic arthritis (JIA) responding to two treatment periods with exclusive enteral nutrition (EEN)
Berntson, Lillemor; Agback, Peter; Dicksved, Johan.
Research article2016Peer reviewed
Evaluation of growth, metabolism and production of potentially bioactive components during fermentation of barley with Lactobacillus reuteri
Pallin, Anton; Agback, Peter; Jonsson, Hans et al.
Research article2016Peer reviewedOpen access
Green Diesel from Kraft Lignin in Three Steps
Löfstedt, Joakim; Agback, Peter; Eriksson, Sören et al.
2015
Research article2015Peer reviewed
Root morphology and cluster root formation by seabuckthorn (Hippophae rhamnoides L.) in response to nitrogen, phosphorus and iron deficiency
Shah, Syed rehmat ullah; Agback, Peter; Lundquist, Per-Olof.
2014
Conference abstract2014Peer reviewedOpen access
Urine metabolite profiles in normal weight and overweight dogs
Söder, Josefin; Hagman, Ragnvi; Dicksved, Johan et al.
2007
Research article2007Peer reviewed
Thyroid receptor ligands. Part 7: Indirect antagonists of the thyroid hormone receptor with improved affinity
Malm, Johan; Gordon, Sandra; Brandt, Peter et al.
Research article2007Peer reviewed
Thyroid receptor ligands. Part 8: Thyromimetics derived from N-acylated-alpha-amino acid derivatives displaying modulated pharmacological selectivity compared with KB-141
Garg, Neeraj; Li, Yi-Lin; Collazo, Ana Maria Garcia et al.
2006
Research article2006Peer reviewed
Thyroid receptor ligands. 6. A high affinity "direct antagonist" selective for the thyroid hormone receptor
Koehler, Konrad; Gordon, Sandra; Brandt, Peter et al.
2005
Research article2005Peer reviewed
Thyroid receptor ligands. 3. Design and synthesis of 3,5-dihalo-4-alkoxyphenylalkanoic acids as indirect antagonists of the thyroid hormone receptor
Hedfors A, Appelqvist T, Carlsson B, Bladh LG, Litten C, Agback P, Grynfarb M, Koehler KF, Malm J.
Research article2005Peer reviewed
Solid-phase synthesis of a 6-phenylquinolin-2(1H)-one library directed toward nuclear hormone receptors
Ruda, M; Kann, N; Gordon, S et al.
2001
Research article2001Peer reviewed
The first example of a Hoogsteen basepaired DNA duplex in dynamic equilibrium with a Watson-Crick basepaired duplex - A structural (NMR), kinetic and thermodynamic study
Isaksson, J; Zamaratski, E; Maltseva, TV et al.
1999
Research article1999Peer reviewed
A single carbocyclic nucleotide substitution in a 12mer DNA gives a Hoogsteen basepaired duplex (till 38 degrees C) and a hairpin (till 65 degrees C). A 600 MHZ NMR spectroscopic study.
Isaksson, J.; Maltseva, T.; Agback, Peter et al.
1998
Research article1998Peer reviewed
Architecture of nonspecific protein-DNA interactions in the Sso7d-DNA complex
Agback, P; Baumann, H; Knapp, S et al.
1995
Research article1995Peer reviewed
Partially-deuterated nucleotide residues in large DNA duplex simplify the spectral overlap and provide both the J-coupling and nOe informations by the “NMR-window” approach
FOLDESI, A; YAMAKAGE, SI; MALTSEVA, TV et al.
Research article1995Peer reviewed
The diastereospecific synthesis of new 2′,3′-Cis-α-fused carbocyclic nucleosides
Papchikhin, A.; Agback, P.; Plavec, J. et al.
1994
Conference paper1994
Solution conformation of lariat-RNAs and their self-cleavage reactions
Agback P, Glemarec C, Sandstrom A, Yin L, Plavec J, Sund C, Yamakage SI, Viswanadham G, Rousse B, Puri N, Chattopadhyaya J.
Research article1994Peer reviewed
The Synthesis of Lariat‐RNAs and their Conformational Analysis by NMR Spectroscopy: The Study of their Unique Self‐Cleavage Reaction Modelling Some Catalytic RNAs (Ribozymes)
Sund, C.; Rousse, B.; Puri, N. et al.
Research article1994Peer reviewedOpen access
The solution structure of a 3′-phenazinium (Pzn) tethered DNA-RNA duplex with a dangling adenosine: r(5′G-AUUGAA3′):d(5TCAATC3′ - Pzn)
Maltseva, T.V.; Agback, Peter; .
Research article1994Peer reviewed
Remarkable conformational change promoted by 3′-ethylphosphate at the branch-point of a tetrameric lariat-RNA dictates its self-cleavage reaction modelling some catalytic RNAs (ribozymes)
Rousse, Bertrand; Sund, Christian; Glemarec, Corine et al.
Research article1994Peer reviewed
Solution conformation of hexameric & heptameric lariat-RNAs and their self-cleavage reactions which give products mimicking those from some catalytic RNAs (ribozymes)
Rousse, B.; Puri, N.; Viswanadham, G. et al.
Research article1994Peer reviewedOpen access
The differences in the T2 relaxation rates of the protons in the partially-deuteriated and fully protonated sugar residues in a large oligo-DNA (‘NMR-window’) gives complementary structural information
Agback, Peter; Maltseva, T.V.; Yamakage, S.-i. et al.
1993
Research article1993Peer reviewed
The self-cleavage of lariat-RNA
Agback, Peter; Glemarec, Corine; Yin, Lee et al.
Research article1993Peer reviewedOpen access
Direct estimation of base-pair exchange kinetics in oligo DNA by a combination of NOESY and ROESY experiments
Maltseva, T.V.; Yamakage, Shun-ichi; Agback, Peter et al.
Research article1993Peer reviewed
Solution structure of lariat RNA by 500 MHz NMR spectroscopy and molecular dynamics studies in water
Agback, Peter; Sandström, Anders; Yamakage, Shun-ichi et al.
Research article1993Peer reviewed
[4 + 2] and [3 + 2] Cycloaddition reactions of 2',3'-dideoxy-3'-nitro-2',3'-didehydrothymidine with ethyl vinyl ether
Papchikhin, Alexander; Agback, Peter; Plavec, Janez et al.
Research article1993Peer reviewedOpen access
How Much hydration is necessary for the stabilisation of DNA-duplex?
Maltseva, T.V.; Agback, Peter; Chattopadhyaya, J..
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